Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 BTBD7P1-201ENST00000447253 1453 ntBASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AC020658.6-201ENST00000623564 1870 ntBASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AL096865.1-201ENST00000606796 927 ntBASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AJ011932.1-201ENST00000621707 465 ntBASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 SSR4P1-203ENST00000599569 2260 ntBASIC14.61□□□□□ -0.07
DTX4Q9Y2E6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.6□□□□□ -0.07
DTX4Q9Y2E6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms