Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 AC013268.4-201ENST00000637413 2228 ntBASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 TMBIM7P-203ENST00000641617 1718 ntBASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ATAD3AQ9NVI7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 RNA5SP410-201ENST00000516285 106 ntBASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 SLC25A1P1-201ENST00000528351 927 ntBASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.22■□□□□ 0.03
ATAD3AQ9NVI7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 AC023908.3-201ENST00000564211 3047 ntBASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 AL691432.1-201ENST00000596308 1422 ntBASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATAD3AQ9NVI7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms