Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AL353779.1-201ENST00000434793 351 ntBASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 SPDYE18-201ENST00000510091 1050 ntBASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 MIR3197-201ENST00000582241 73 ntBASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM62Q9BVG3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 RPL5P21-201ENST00000404620 815 ntBASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 AC000095.1-201ENST00000603208 874 ntBASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 AL158212.4-201ENST00000624062 1286 ntBASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM62Q9BVG3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM62Q9BVG3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM62Q9BVG3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.39■□□□□ 0.22
TRIM62Q9BVG3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM62Q9BVG3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM62Q9BVG3 SLC7A15P-201ENST00000424028 1363 ntBASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 KRT18P64-201ENST00000434946 1219 ntBASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 RPL13AP25-201ENST00000484130 612 ntBASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 AC127383.1-201ENST00000444697 1800 ntBASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 AL121723.1-201ENST00000445194 1519 ntBASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM62Q9BVG3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM62Q9BVG3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms