Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 EMBP1-201ENST00000458200 901 ntBASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 UNC93B7-201ENST00000509439 705 ntBASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AL589702.1-201ENST00000641229 1509 ntBASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 PMS2P7-201ENST00000506558 1336 ntBASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMSS1Q9BQ75 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 AC148477.8-201ENST00000624298 468 ntBASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 AC007064.4-201ENST00000637740 555 ntBASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.57□□□□□ -0.24
CMSS1Q9BQ75 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMSS1Q9BQ75 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.56□□□□□ -0.24
CMSS1Q9BQ75 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMSS1Q9BQ75 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CMSS1Q9BQ75 AC134407.2-201ENST00000625089 1978 ntBASIC13.56□□□□□ -0.24
CMSS1Q9BQ75 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMSS1Q9BQ75 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms