Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.75□□□□□ -0.05
TM9SF2Q99805 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF2Q99805 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF2Q99805 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.75□□□□□ -0.05
TM9SF2Q99805 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF2Q99805 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.75□□□□□ -0.05
TM9SF2Q99805 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.75□□□□□ -0.05
TM9SF2Q99805 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF2Q99805 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF2Q99805 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 SPDYE14P-201ENST00000442619 822 ntBASIC14.74□□□□□ -0.05
TM9SF2Q99805 AC125807.1-201ENST00000483097 614 ntBASIC14.74□□□□□ -0.05
TM9SF2Q99805 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PRYP6-201ENST00000514804 343 ntBASIC14.74□□□□□ -0.05
TM9SF2Q99805 RNA5SP421-201ENST00000516864 134 ntBASIC14.74□□□□□ -0.05
TM9SF2Q99805 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 AC073389.1-201ENST00000595595 795 ntBASIC14.74□□□□□ -0.05
TM9SF2Q99805 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TM9SF2Q99805 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF2Q99805 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AL365209.1-201ENST00000624418 6473 ntBASIC14.73□□□□□ -0.05
TM9SF2Q99805 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AC107890.1-201ENST00000422478 521 ntBASIC14.73□□□□□ -0.05
TM9SF2Q99805 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AL138918.1-201ENST00000568306 659 ntBASIC14.73□□□□□ -0.05
TM9SF2Q99805 AC051619.7-201ENST00000568314 623 ntBASIC14.73□□□□□ -0.05
TM9SF2Q99805 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 AC092364.2-202ENST00000597012 1073 ntBASIC14.73□□□□□ -0.05
TM9SF2Q99805 MIR6080-201ENST00000617359 66 ntBASIC14.73□□□□□ -0.05
TM9SF2Q99805 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF2Q99805 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF2Q99805 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms