Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 AC140113.2-201ENST00000604370 208 ntBASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 SPTSSB-204ENST00000617024 1292 ntBASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 CICP11-201ENST00000434745 2827 ntBASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 AC126365.1-201ENST00000578585 1514 ntBASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.33■□□□□ 0.52
CHAMP1Q96JM3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 AC142381.1-201ENST00000426099 345 ntBASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 PGAM5P1-201ENST00000518923 814 ntBASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SLC25A1P1-201ENST00000528351 927 ntBASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 AC007292.2-201ENST00000593524 1812 ntBASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 AC097359.2-201ENST00000604992 2389 ntBASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHAMP1Q96JM3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 CICP14-201ENST00000629111 2732 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms