Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SH3KBP1Q96B97 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.71■□□□□ 0.1
SH3KBP1Q96B97 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 LINC00554-201ENST00000564841 3011 ntBASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 AL844908.2-201ENST00000609461 460 ntBASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH3KBP1Q96B97 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AC010491.1-201ENST00000563101 2797 ntBASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PIN1P1-201ENST00000412108 996 ntBASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AC245100.5-201ENST00000452108 331 ntBASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 SERBP1P5-201ENST00000510079 1181 ntBASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AL136379.1-201ENST00000623471 2642 ntBASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms