Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF34Q969K3 EEF1DP4-201ENST00000446006 880 ntBASIC16.55■□□□□ 0.24
RNF34Q969K3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF34Q969K3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 AC010336.2-201ENST00000564226 506 ntBASIC16.55■□□□□ 0.24
RNF34Q969K3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF34Q969K3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF34Q969K3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF34Q969K3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 AC022144.1-201ENST00000602255 1580 ntBASIC16.55■□□□□ 0.24
RNF34Q969K3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF34Q969K3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF34Q969K3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 AL365203.3-201ENST00000609742 2057 ntBASIC16.54■□□□□ 0.24
RNF34Q969K3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RNF34Q969K3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF34Q969K3 TSSK5P-201ENST00000423978 907 ntBASIC16.54■□□□□ 0.24
RNF34Q969K3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF34Q969K3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF34Q969K3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF34Q969K3 SDHAP3-202ENST00000515467 728 ntBASIC16.54■□□□□ 0.24
RNF34Q969K3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.54■□□□□ 0.24
RNF34Q969K3 AC044860.1-202ENST00000559481 777 ntBASIC16.54■□□□□ 0.24
RNF34Q969K3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF34Q969K3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF34Q969K3 AL109936.8-201ENST00000641772 604 ntBASIC16.54■□□□□ 0.24
RNF34Q969K3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF34Q969K3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF34Q969K3 PAUPAR-201ENST00000630360 2965 ntBASIC16.54■□□□□ 0.24
RNF34Q969K3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF34Q969K3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF34Q969K3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF34Q969K3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 AC004890.2-204ENST00000481968 304 ntBASIC16.53■□□□□ 0.24
RNF34Q969K3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF34Q969K3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF34Q969K3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF34Q969K3 AL844908.2-201ENST00000609461 460 ntBASIC16.53■□□□□ 0.24
RNF34Q969K3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF34Q969K3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF34Q969K3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms