Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 AC092127.1-201ENST00000567093 3455 ntBASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 LINC01101-201ENST00000622953 1884 ntBASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 WASH6P-202ENST00000359512 1437 ntBASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTN4IP1Q8WWV3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 PGAM5P1-201ENST00000518923 814 ntBASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 PMS2P7-201ENST00000506558 1336 ntBASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RTN4IP1Q8WWV3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms