Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 AP006294.1-201ENST00000415407 339 ntBASIC14.11□□□□□ -0.15
RNF138Q8WVD3 SOCS2P1-201ENST00000417727 557 ntBASIC14.11□□□□□ -0.15
RNF138Q8WVD3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 AL162726.2-201ENST00000438986 1017 ntBASIC14.11□□□□□ -0.15
RNF138Q8WVD3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 AC005225.4-201ENST00000557330 545 ntBASIC14.11□□□□□ -0.15
RNF138Q8WVD3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF138Q8WVD3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CU639417.3-201ENST00000624240 1404 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AL645937.2-201ENST00000396808 931 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 NME2P1-201ENST00000426182 414 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CR383656.12-201ENST00000549567 513 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 SAMD11P1-201ENST00000571429 661 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CLUHP6-201ENST00000580789 941 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AC005252.2-201ENST00000624630 1141 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 AL033527.5-201ENST00000641382 801 ntBASIC14.1□□□□□ -0.15
RNF138Q8WVD3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF138Q8WVD3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 MROH4P-201ENST00000431302 1578 ntBASIC14.09□□□□□ -0.15
RNF138Q8WVD3 AC007787.1-201ENST00000588095 1583 ntBASIC14.09□□□□□ -0.15
RNF138Q8WVD3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF138Q8WVD3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms