Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 GAPDHP21-201ENST00000450301 1010 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ZNF890P-202ENST00000530367 1156 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 AC104794.3-201ENST00000566840 1248 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 U82695.1-201ENST00000635752 1889 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 AC007541.1-201ENST00000570282 1469 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 SPDYE17-201ENST00000412399 783 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 RN7SL692P-201ENST00000464677 288 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AC044860.1-202ENST00000559481 777 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AL603832.2-201ENST00000566195 2125 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AL365330.1-201ENST00000607459 531 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AL033527.5-202ENST00000641632 1098 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 AC013268.4-201ENST00000637413 2228 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDND2Q8NHS1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDND2Q8NHS1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms