Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AC044860.1-202ENST00000559481 777 ntBASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 AL109936.8-201ENST00000641772 604 ntBASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.5
CCDC148Q8NFR7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC148Q8NFR7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC148Q8NFR7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms