Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 AC013467.2-201ENST00000605472 835 ntBASIC13.21□□□□□ -0.29
COMMD1Q8N668 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 AC012569.1-201ENST00000591191 1524 ntBASIC13.21□□□□□ -0.29
COMMD1Q8N668 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
COMMD1Q8N668 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COMMD1Q8N668 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.21□□□□□ -0.3
COMMD1Q8N668 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.21□□□□□ -0.3
COMMD1Q8N668 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.21□□□□□ -0.3
COMMD1Q8N668 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
COMMD1Q8N668 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.21□□□□□ -0.3
COMMD1Q8N668 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
COMMD1Q8N668 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ELL2P1-201ENST00000413990 1906 ntBASIC13.2□□□□□ -0.3
COMMD1Q8N668 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 AP006288.1-201ENST00000446065 395 ntBASIC13.2□□□□□ -0.3
COMMD1Q8N668 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 FAM86C2P-203ENST00000528684 1004 ntBASIC13.2□□□□□ -0.3
COMMD1Q8N668 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 AL161645.1-201ENST00000622716 1255 ntBASIC13.2□□□□□ -0.3
COMMD1Q8N668 AC087481.3-201ENST00000602886 1894 ntBASIC13.2□□□□□ -0.3
COMMD1Q8N668 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 KRT8P49-201ENST00000604166 1432 ntBASIC13.2□□□□□ -0.3
COMMD1Q8N668 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COMMD1Q8N668 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.2□□□□□ -0.3
COMMD1Q8N668 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms