Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX5Q8N196 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SIX5Q8N196 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
SIX5Q8N196 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX5Q8N196 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 PCDH8P1-201ENST00000428983 2773 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 PCDHA1-201ENST00000378133 2726 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.17■□□□□ 0.18
SIX5Q8N196 MIR663B-201ENST00000408361 115 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 TOMM22P5-201ENST00000416399 439 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.17■□□□□ 0.18
SIX5Q8N196 AC007969.1-201ENST00000433675 447 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 AC243562.2-201ENST00000561247 970 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 RN7SL371P-201ENST00000578099 267 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
SIX5Q8N196 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.17■□□□□ 0.18
SIX5Q8N196 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.17■□□□□ 0.18
SIX5Q8N196 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.17■□□□□ 0.18
SIX5Q8N196 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX5Q8N196 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX5Q8N196 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SIX5Q8N196 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SIX5Q8N196 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIX5Q8N196 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.16■□□□□ 0.18
SIX5Q8N196 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SIX5Q8N196 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX5Q8N196 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIX5Q8N196 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SIX5Q8N196 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 BTBD6P1-201ENST00000412176 1267 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 CNN2P8-201ENST00000421872 913 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 KRT18P64-201ENST00000434946 1219 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 EEF1DP4-201ENST00000446006 880 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 AKR7A2P1-201ENST00000460134 915 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.16■□□□□ 0.18
SIX5Q8N196 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX5Q8N196 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.16■□□□□ 0.18
SIX5Q8N196 GNRHR2-203ENST00000581100 1187 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 AC016629.1-201ENST00000596579 586 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SIX5Q8N196 AL008638.5-201ENST00000623814 1298 ntBASIC16.16■□□□□ 0.18
SIX5Q8N196 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIX5Q8N196 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX5Q8N196 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX5Q8N196 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms