Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 AC016734.2-201ENST00000624325 1377 ntBASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 ABCD1P5-201ENST00000445663 754 ntBASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AC096582.2-201ENST00000510860 516 ntBASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AC064862.7-201ENST00000604520 867 ntBASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD2Q8IV50 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 NSUN5P1-202ENST00000421140 1535 ntBASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 NSUN5P2-203ENST00000457352 1529 ntBASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 BX276092.5-203ENST00000456199 560 ntBASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms