Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 EIF3FP3-201ENST00000434851 1086 ntBASIC21■□□□□ 0.95
KRT28Q7Z3Y7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 AC018635.2-201ENST00000608625 364 ntBASIC21■□□□□ 0.95
KRT28Q7Z3Y7 AF254983.2-201ENST00000612331 135 ntBASIC21■□□□□ 0.95
KRT28Q7Z3Y7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 AC007787.1-201ENST00000588095 1583 ntBASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT28Q7Z3Y7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 KRT8P14-201ENST00000414254 1442 ntBASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 AC069218.1-201ENST00000435269 762 ntBASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 AC012618.1-201ENST00000461223 412 ntBASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 AC006480.2-201ENST00000609770 1337 ntBASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT28Q7Z3Y7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT28Q7Z3Y7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT28Q7Z3Y7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms