Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 KRT18P13-201ENST00000400056 1290 ntBASIC14.67□□□□□ -0.06
TUBA1AQ71U36 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AC004832.2-201ENST00000426397 482 ntBASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AL031432.2-201ENST00000566714 459 ntBASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AL928711.1-201ENST00000570165 459 ntBASIC14.67□□□□□ -0.06
TUBA1AQ71U36 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AC068137.2-201ENST00000605408 478 ntBASIC14.67□□□□□ -0.06
TUBA1AQ71U36 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 AC139749.1-202ENST00000617529 3139 ntBASIC14.67□□□□□ -0.06
TUBA1AQ71U36 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1AQ71U36 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 MYO15B-237ENST00000642007 4893 ntBASIC14.66□□□□□ -0.06
TUBA1AQ71U36 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 SNX33P1-201ENST00000592116 1762 ntBASIC14.66□□□□□ -0.06
TUBA1AQ71U36 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 HCG4-201ENST00000418983 998 ntBASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 FAM58CP-201ENST00000435741 640 ntBASIC14.66□□□□□ -0.06
TUBA1AQ71U36 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 MIR4492-201ENST00000581627 80 ntBASIC14.66□□□□□ -0.06
TUBA1AQ71U36 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 AL645728.2-201ENST00000641974 660 ntBASIC14.66□□□□□ -0.06
TUBA1AQ71U36 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1AQ71U36 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms