Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 AC013268.4-201ENST00000637413 2228 ntBASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 SDHAP3-202ENST00000515467 728 ntBASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 MIR4745-201ENST00000577608 62 ntBASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 MIR3197-201ENST00000582241 73 ntBASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 NORAD-201ENST00000565493 5339 ntBASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TTC39BQ5VTQ0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 MRPS18AP1-201ENST00000414458 589 ntBASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 TSPY16P-201ENST00000449843 468 ntBASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TTC39BQ5VTQ0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TTC39BQ5VTQ0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
TTC39BQ5VTQ0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TTC39BQ5VTQ0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 AC023824.1-201ENST00000562945 2975 ntBASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 AC011477.6-201ENST00000604980 1927 ntBASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TTC39BQ5VTQ0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms