Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM27BQ5VT28 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 RPL13P2-201ENST00000440687 659 ntBASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AL844908.2-201ENST00000609461 460 ntBASIC13.8□□□□□ -0.2
FAM27BQ5VT28 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AC013268.4-201ENST00000637413 2228 ntBASIC13.8□□□□□ -0.2
FAM27BQ5VT28 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM27BQ5VT28 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM27BQ5VT28 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms