Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC012044.1-201ENST00000603431 297 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 PTPN20CP-201ENST00000614090 920 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 ENPP7P14-201ENST00000621765 1040 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 SERBP1P2-201ENST00000436888 1164 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 RNMTL1P1-201ENST00000454103 560 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 TMCO5B-205ENST00000530020 894 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 AC012158.2-201ENST00000536546 354 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 AP003680.1-201ENST00000598970 3660 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 FAM86KP-201ENST00000509817 987 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 POU5F1P2-201ENST00000521750 823 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 AC009955.4-201ENST00000597192 544 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 AC244250.3-201ENST00000620749 366 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 AL161773.1-201ENST00000624845 863 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 AC005618.3-201ENST00000624928 458 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 AC018470.1-201ENST00000624790 3129 ntBASIC13.44□□□□□ -0.26
LRRK2Q5S007 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LRRK2Q5S007 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRK2Q5S007 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 FAM58BP-201ENST00000439056 645 ntBASIC13.43□□□□□ -0.26
LRRK2Q5S007 AC005324.6-201ENST00000587972 613 ntBASIC13.43□□□□□ -0.26
LRRK2Q5S007 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms