Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 OR8S1-201ENST00000310194 1080 ntBASIC18.07■□□□□ 0.48
USH1GQ495M9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.07■□□□□ 0.48
USH1GQ495M9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.07■□□□□ 0.48
USH1GQ495M9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.07■□□□□ 0.48
USH1GQ495M9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.07■□□□□ 0.48
USH1GQ495M9 AL359711.2-201ENST00000563105 872 ntBASIC18.07■□□□□ 0.48
USH1GQ495M9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.07■□□□□ 0.48
USH1GQ495M9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.07■□□□□ 0.48
USH1GQ495M9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.07■□□□□ 0.48
USH1GQ495M9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.07■□□□□ 0.48
USH1GQ495M9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.07■□□□□ 0.48
USH1GQ495M9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
USH1GQ495M9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
USH1GQ495M9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
USH1GQ495M9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
USH1GQ495M9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USH1GQ495M9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 AC244107.1-201ENST00000442033 332 ntBASIC18.06■□□□□ 0.48
USH1GQ495M9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.06■□□□□ 0.48
USH1GQ495M9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 KRT18P43-201ENST00000469825 1281 ntBASIC18.06■□□□□ 0.48
USH1GQ495M9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.06■□□□□ 0.48
USH1GQ495M9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
USH1GQ495M9 BRI3BPP1-201ENST00000594224 787 ntBASIC18.06■□□□□ 0.48
USH1GQ495M9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.06■□□□□ 0.48
USH1GQ495M9 AL049840.4-201ENST00000602422 811 ntBASIC18.06■□□□□ 0.48
USH1GQ495M9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.06■□□□□ 0.48
USH1GQ495M9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
USH1GQ495M9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USH1GQ495M9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USH1GQ495M9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.05■□□□□ 0.48
USH1GQ495M9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.05■□□□□ 0.48
USH1GQ495M9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.05■□□□□ 0.48
USH1GQ495M9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USH1GQ495M9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USH1GQ495M9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.05■□□□□ 0.48
USH1GQ495M9 AL442647.2-201ENST00000429864 857 ntBASIC18.05■□□□□ 0.48
USH1GQ495M9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.05■□□□□ 0.48
USH1GQ495M9 VDAC1P7-201ENST00000462417 847 ntBASIC18.05■□□□□ 0.48
USH1GQ495M9 HILS1-202ENST00000545329 423 ntBASIC18.05■□□□□ 0.48
USH1GQ495M9 AC010319.3-201ENST00000597028 470 ntBASIC18.05■□□□□ 0.48
USH1GQ495M9 AC133539.2-201ENST00000604757 467 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms