Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ABCD1P5-201ENST00000445663 754 ntBASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 AC245100.5-201ENST00000452108 331 ntBASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 BX005266.1-201ENST00000473402 457 ntBASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 AC087388.1-201ENST00000571370 1112 ntBASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 AL121956.5-201ENST00000625261 221 ntBASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 AC089987.1-201ENST00000551654 2209 ntBASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC6LQ2NKX8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 KRT8P26-201ENST00000534154 1276 ntBASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 AL136038.3-201ENST00000561909 1096 ntBASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 PI4KAP1-204ENST00000612579 1703 ntBASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 AP001282.1-201ENST00000531301 1499 ntBASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 MTHFR-210ENST00000641407 2387 ntBASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERCC6LQ2NKX8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 AC099521.3-201ENST00000624251 2938 ntBASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 MINOS1P3-201ENST00000457048 203 ntBASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 AC005412.3-201ENST00000580309 715 ntBASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.77■□□□□ 0.28
ERCC6LQ2NKX8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms