Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CD47Q08722 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 AC104109.2-201ENST00000602919 1418 ntBASIC14.74□□□□□ -0.05
CD47Q08722 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD47Q08722 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.73□□□□□ -0.05
CD47Q08722 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.73□□□□□ -0.05
CD47Q08722 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 MROH4P-201ENST00000431302 1578 ntBASIC14.73□□□□□ -0.05
CD47Q08722 AJ011931.1-201ENST00000618749 2492 ntBASIC14.73□□□□□ -0.05
CD47Q08722 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD47Q08722 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD47Q08722 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD47Q08722 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.73□□□□□ -0.05
CD47Q08722 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.73□□□□□ -0.05
CD47Q08722 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD47Q08722 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CD47Q08722 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD47Q08722 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD47Q08722 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CD47Q08722 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.72□□□□□ -0.05
CD47Q08722 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CD47Q08722 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CD47Q08722 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.72□□□□□ -0.05
CD47Q08722 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.72□□□□□ -0.05
CD47Q08722 AC096734.2-201ENST00000562054 433 ntBASIC14.72□□□□□ -0.05
CD47Q08722 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 AL121894.2-201ENST00000602977 491 ntBASIC14.72□□□□□ -0.05
CD47Q08722 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.72□□□□□ -0.05
CD47Q08722 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 AC007064.4-201ENST00000637740 555 ntBASIC14.72□□□□□ -0.05
CD47Q08722 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CD47Q08722 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD47Q08722 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms