Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC005498.2-205ENST00000593218 784 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AC004890.2-204ENST00000481968 304 ntBASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFRSF17Q02223 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 RPL13P2-201ENST00000440687 659 ntBASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFRSF17Q02223 AC027796.2-201ENST00000575326 344 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms