Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX4P78413 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX4P78413 AC016027.1-202ENST00000607927 1699 ntBASIC16.53■□□□□ 0.24
IRX4P78413 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.53■□□□□ 0.24
IRX4P78413 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
IRX4P78413 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.52■□□□□ 0.24
IRX4P78413 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.52■□□□□ 0.24
IRX4P78413 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.52■□□□□ 0.24
IRX4P78413 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
IRX4P78413 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
IRX4P78413 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 U91328.1-201ENST00000437528 223 ntBASIC16.52■□□□□ 0.24
IRX4P78413 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.52■□□□□ 0.24
IRX4P78413 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.52■□□□□ 0.24
IRX4P78413 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 AC022494.1-201ENST00000466044 728 ntBASIC16.52■□□□□ 0.24
IRX4P78413 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX4P78413 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.52■□□□□ 0.24
IRX4P78413 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.52■□□□□ 0.24
IRX4P78413 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.52■□□□□ 0.24
IRX4P78413 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 SPDYE12P-201ENST00000618416 771 ntBASIC16.52■□□□□ 0.24
IRX4P78413 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX4P78413 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.52■□□□□ 0.23
IRX4P78413 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 AC023824.1-201ENST00000562945 2975 ntBASIC16.52■□□□□ 0.23
IRX4P78413 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.52■□□□□ 0.23
IRX4P78413 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
IRX4P78413 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.52■□□□□ 0.23
IRX4P78413 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX4P78413 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IRX4P78413 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.51■□□□□ 0.23
IRX4P78413 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX4P78413 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX4P78413 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX4P78413 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 KRT8P39-201ENST00000396270 1433 ntBASIC16.51■□□□□ 0.23
IRX4P78413 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX4P78413 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms