Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN20P56880 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.53□□□□□ -0.08
CLDN20P56880 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN20P56880 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN20P56880 AC026979.3-201ENST00000607315 403 ntBASIC14.53□□□□□ -0.08
CLDN20P56880 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 CETN4P-206ENST00000642099 2168 ntBASIC14.53□□□□□ -0.08
CLDN20P56880 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 AC023908.3-201ENST00000564211 3047 ntBASIC14.52□□□□□ -0.08
CLDN20P56880 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN20P56880 AL136982.4-201ENST00000437689 1740 ntBASIC14.52□□□□□ -0.08
CLDN20P56880 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN20P56880 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN20P56880 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN20P56880 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CLDN20P56880 AL139010.1-201ENST00000454878 894 ntBASIC14.52□□□□□ -0.09
CLDN20P56880 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.52□□□□□ -0.09
CLDN20P56880 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CLDN20P56880 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN20P56880 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN20P56880 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CLDN20P56880 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CLDN20P56880 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN20P56880 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN20P56880 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLDN20P56880 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLDN20P56880 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN20P56880 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
CLDN20P56880 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN20P56880 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLDN20P56880 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 RPL37AP1-201ENST00000412502 279 ntBASIC14.51□□□□□ -0.09
CLDN20P56880 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN20P56880 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 HLA-V-204ENST00000476601 1289 ntBASIC14.51□□□□□ -0.09
CLDN20P56880 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN20P56880 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN20P56880 AL079307.3-201ENST00000556114 283 ntBASIC14.51□□□□□ -0.09
CLDN20P56880 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN20P56880 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN20P56880 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN20P56880 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN20P56880 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms