Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.03■□□□□ -0
CLDN8P56748 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.03■□□□□ -0
CLDN8P56748 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDN8P56748 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN8P56748 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN8P56748 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN8P56748 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN8P56748 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN8P56748 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN8P56748 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN8P56748 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.02■□□□□ -0
CLDN8P56748 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.02■□□□□ -0
CLDN8P56748 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN8P56748 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CLDN8P56748 KRT18P58-201ENST00000527480 1120 ntBASIC15.02■□□□□ -0
CLDN8P56748 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.02■□□□□ -0
CLDN8P56748 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.02■□□□□ -0
CLDN8P56748 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.02■□□□□ -0
CLDN8P56748 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.02■□□□□ -0
CLDN8P56748 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN8P56748 AC068587.6-202ENST00000641839 5619 ntBASIC15.02□□□□□ -0.01
CLDN8P56748 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN8P56748 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN8P56748 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN8P56748 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.02□□□□□ -0.01
CLDN8P56748 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN8P56748 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN8P56748 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
CLDN8P56748 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN8P56748 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN8P56748 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.01□□□□□ -0.01
CLDN8P56748 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLDN8P56748 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 AL353705.2-201ENST00000428243 662 ntBASIC15.01□□□□□ -0.01
CLDN8P56748 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN8P56748 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 AL136379.1-201ENST00000623471 2642 ntBASIC15.01□□□□□ -0.01
CLDN8P56748 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.01□□□□□ -0.01
CLDN8P56748 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN8P56748 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN8P56748 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN8P56748 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms