Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
CLDN6P56747 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN6P56747 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 AC092171.3-201ENST00000610122 2651 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLDN6P56747 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN6P56747 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 SLC25A24P2-201ENST00000415059 510 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 TOMM22P5-201ENST00000416399 439 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 KRT8P13-201ENST00000463294 1010 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.11■□□□□ 0.01
CLDN6P56747 SLED1-202ENST00000512051 380 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 AP001063.1-201ENST00000568332 529 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN6P56747 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN6P56747 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN6P56747 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.11■□□□□ 0.01
CLDN6P56747 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN6P56747 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN6P56747 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN6P56747 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN6P56747 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN6P56747 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CLDN6P56747 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN6P56747 FAM197Y7-201ENST00000432892 766 ntBASIC15.1■□□□□ 0.01
CLDN6P56747 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.1■□□□□ 0.01
CLDN6P56747 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN6P56747 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.1■□□□□ 0.01
CLDN6P56747 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 AL607033.1-201ENST00000623900 1599 ntBASIC15.1■□□□□ 0.01
CLDN6P56747 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN6P56747 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN6P56747 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN6P56747 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN6P56747 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN6P56747 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms