Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GFRA1P56159 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GFRA1P56159 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GFRA1P56159 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.08□□□□□ -0.15
GFRA1P56159 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.08□□□□□ -0.16
GFRA1P56159 AL512384.1-201ENST00000406683 331 ntBASIC14.08□□□□□ -0.16
GFRA1P56159 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
GFRA1P56159 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.08□□□□□ -0.16
GFRA1P56159 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 KRT17P7-201ENST00000451704 1104 ntBASIC14.08□□□□□ -0.16
GFRA1P56159 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.08□□□□□ -0.16
GFRA1P56159 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.08□□□□□ -0.16
GFRA1P56159 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.08□□□□□ -0.16
GFRA1P56159 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.08□□□□□ -0.16
GFRA1P56159 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
GFRA1P56159 AL049840.4-201ENST00000602422 811 ntBASIC14.08□□□□□ -0.16
GFRA1P56159 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 IGHV3-72-202ENST00000621503 303 ntBASIC14.08□□□□□ -0.16
GFRA1P56159 AL033527.5-201ENST00000641382 801 ntBASIC14.08□□□□□ -0.16
GFRA1P56159 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.08□□□□□ -0.16
GFRA1P56159 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GFRA1P56159 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.08□□□□□ -0.16
GFRA1P56159 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.08□□□□□ -0.16
GFRA1P56159 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GFRA1P56159 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.08□□□□□ -0.16
GFRA1P56159 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 INTS4P2-202ENST00000614726 2019 ntBASIC14.07□□□□□ -0.16
GFRA1P56159 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GFRA1P56159 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 RN7SL837P-201ENST00000463010 287 ntBASIC14.07□□□□□ -0.16
GFRA1P56159 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.07□□□□□ -0.16
GFRA1P56159 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.07□□□□□ -0.16
GFRA1P56159 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.07□□□□□ -0.16
GFRA1P56159 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.07□□□□□ -0.16
GFRA1P56159 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.07□□□□□ -0.16
GFRA1P56159 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GFRA1P56159 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GFRA1P56159 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
GFRA1P56159 AP003680.1-201ENST00000598970 3660 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms