Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHB4P54760 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EPHB4P54760 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
EPHB4P54760 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHB4P54760 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
EPHB4P54760 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
EPHB4P54760 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHB4P54760 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.76■□□□□ 0.43
EPHB4P54760 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.76■□□□□ 0.43
EPHB4P54760 GOLGA2P4-201ENST00000441462 777 ntBASIC17.76■□□□□ 0.43
EPHB4P54760 CSF2RBP1-201ENST00000447905 391 ntBASIC17.76■□□□□ 0.43
EPHB4P54760 AC023824.1-201ENST00000562945 2975 ntBASIC17.76■□□□□ 0.43
EPHB4P54760 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHB4P54760 MIR6069-201ENST00000620069 79 ntBASIC17.76■□□□□ 0.43
EPHB4P54760 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHB4P54760 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.76■□□□□ 0.43
EPHB4P54760 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHB4P54760 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.76■□□□□ 0.43
EPHB4P54760 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB4P54760 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 AL645728.1-201ENST00000366221 2101 ntBASIC17.75■□□□□ 0.43
EPHB4P54760 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.75■□□□□ 0.43
EPHB4P54760 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 AC005229.1-201ENST00000392885 409 ntBASIC17.75■□□□□ 0.43
EPHB4P54760 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.75■□□□□ 0.43
EPHB4P54760 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.75■□□□□ 0.43
EPHB4P54760 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.75■□□□□ 0.43
EPHB4P54760 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.75■□□□□ 0.43
EPHB4P54760 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB4P54760 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB4P54760 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB4P54760 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
EPHB4P54760 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
EPHB4P54760 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
EPHB4P54760 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 ME2P1-201ENST00000426028 1970 ntBASIC17.74■□□□□ 0.43
EPHB4P54760 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.74■□□□□ 0.43
EPHB4P54760 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.74■□□□□ 0.43
EPHB4P54760 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
EPHB4P54760 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB4P54760 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms