Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB3P54284 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 AL138709.1-201ENST00000614840 1693 ntBASIC18.54■□□□□ 0.56
CACNB3P54284 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB3P54284 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 DUX4L45-201ENST00000566406 1057 ntBASIC18.54■□□□□ 0.56
CACNB3P54284 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB3P54284 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNB3P54284 MIR4741-201ENST00000579822 90 ntBASIC18.54■□□□□ 0.56
CACNB3P54284 AL118558.3-201ENST00000607414 1079 ntBASIC18.54■□□□□ 0.56
CACNB3P54284 AC138951.2-201ENST00000623455 1161 ntBASIC18.54■□□□□ 0.56
CACNB3P54284 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB3P54284 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB3P54284 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB3P54284 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB3P54284 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CACNB3P54284 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CACNB3P54284 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 AC124067.4-201ENST00000519691 2379 ntBASIC18.53■□□□□ 0.56
CACNB3P54284 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 MIR1247-201ENST00000408206 136 ntBASIC18.53■□□□□ 0.56
CACNB3P54284 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNB3P54284 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNB3P54284 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNB3P54284 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.53■□□□□ 0.56
CACNB3P54284 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CACNB3P54284 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.53■□□□□ 0.56
CACNB3P54284 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 AP005019.2-201ENST00000615104 511 ntBASIC18.53■□□□□ 0.56
CACNB3P54284 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.53■□□□□ 0.56
CACNB3P54284 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CACNB3P54284 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB3P54284 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CACNB3P54284 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CACNB3P54284 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.52■□□□□ 0.56
CACNB3P54284 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.52■□□□□ 0.56
CACNB3P54284 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.52■□□□□ 0.56
CACNB3P54284 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNB3P54284 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms