Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TM4SF4P48230 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF4P48230 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
TM4SF4P48230 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF4P48230 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF4P48230 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TM4SF4P48230 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF4P48230 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TM4SF4P48230 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 ME2P1-201ENST00000426028 1970 ntBASIC17.61■□□□□ 0.41
TM4SF4P48230 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TM4SF4P48230 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TM4SF4P48230 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF4P48230 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF4P48230 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF4P48230 RPL18P13-201ENST00000478088 569 ntBASIC17.61■□□□□ 0.41
TM4SF4P48230 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF4P48230 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF4P48230 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.61■□□□□ 0.41
TM4SF4P48230 AC100827.2-201ENST00000563214 1194 ntBASIC17.61■□□□□ 0.41
TM4SF4P48230 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF4P48230 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TM4SF4P48230 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 AC068880.1-201ENST00000507289 2297 ntBASIC17.61■□□□□ 0.41
TM4SF4P48230 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF4P48230 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TM4SF4P48230 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.6■□□□□ 0.41
TM4SF4P48230 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM4SF4P48230 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF4P48230 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF4P48230 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TM4SF4P48230 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF4P48230 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 MIR1227-201ENST00000408484 88 ntBASIC17.6■□□□□ 0.41
TM4SF4P48230 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF4P48230 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.6■□□□□ 0.41
TM4SF4P48230 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.6■□□□□ 0.41
TM4SF4P48230 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.6■□□□□ 0.41
TM4SF4P48230 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.6■□□□□ 0.41
TM4SF4P48230 AC141586.1-203ENST00000567242 366 ntBASIC17.6■□□□□ 0.41
TM4SF4P48230 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.6■□□□□ 0.41
TM4SF4P48230 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF4P48230 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.6■□□□□ 0.41
TM4SF4P48230 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TM4SF4P48230 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF4P48230 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 AC005052.1-201ENST00000625181 2492 ntBASIC17.59■□□□□ 0.41
TM4SF4P48230 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 AC025271.4-201ENST00000621477 1726 ntBASIC17.59■□□□□ 0.41
TM4SF4P48230 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms