Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP13P45452 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP13P45452 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
MMP13P45452 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP13P45452 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP13P45452 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP13P45452 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.46■□□□□ 0.22
MMP13P45452 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP13P45452 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP13P45452 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MMP13P45452 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MMP13P45452 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MMP13P45452 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP13P45452 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MMP13P45452 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP13P45452 HLA-J-203ENST00000494367 1087 ntBASIC16.45■□□□□ 0.22
MMP13P45452 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.45■□□□□ 0.22
MMP13P45452 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.45■□□□□ 0.22
MMP13P45452 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 MIR6080-201ENST00000617359 66 ntBASIC16.45■□□□□ 0.22
MMP13P45452 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MMP13P45452 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 AL359258.3-201ENST00000622910 2331 ntBASIC16.45■□□□□ 0.22
MMP13P45452 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP13P45452 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP13P45452 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MMP13P45452 AL139400.1-201ENST00000366220 510 ntBASIC16.44■□□□□ 0.22
MMP13P45452 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 SPDYE7P-202ENST00000420373 878 ntBASIC16.44■□□□□ 0.22
MMP13P45452 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 AC109322.1-201ENST00000524499 1264 ntBASIC16.44■□□□□ 0.22
MMP13P45452 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 AC003101.2-201ENST00000612557 442 ntBASIC16.44■□□□□ 0.22
MMP13P45452 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MMP13P45452 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP13P45452 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 AC007191.1-201ENST00000623179 2995 ntBASIC16.44■□□□□ 0.22
MMP13P45452 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP13P45452 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP13P45452 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 AC090616.6-203ENST00000579186 1945 ntBASIC16.43■□□□□ 0.22
MMP13P45452 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP13P45452 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms