Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.34■□□□□ 0.21
SCNN1AP37088 BCRP1-201ENST00000444246 691 ntBASIC16.34■□□□□ 0.21
SCNN1AP37088 SPTLC1P1-201ENST00000447199 261 ntBASIC16.34■□□□□ 0.21
SCNN1AP37088 UGT1A2P-201ENST00000454886 866 ntBASIC16.34■□□□□ 0.21
SCNN1AP37088 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.34■□□□□ 0.21
SCNN1AP37088 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.34■□□□□ 0.21
SCNN1AP37088 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SCNN1AP37088 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
SCNN1AP37088 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.34■□□□□ 0.21
SCNN1AP37088 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCNN1AP37088 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCNN1AP37088 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.34■□□□□ 0.21
SCNN1AP37088 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SCNN1AP37088 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SCNN1AP37088 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SCNN1AP37088 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.34■□□□□ 0.21
SCNN1AP37088 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCNN1AP37088 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.34■□□□□ 0.21
SCNN1AP37088 C18orf15-201ENST00000623680 2534 ntBASIC16.34■□□□□ 0.21
SCNN1AP37088 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCNN1AP37088 AC046158.3-201ENST00000624947 2558 ntBASIC16.33■□□□□ 0.21
SCNN1AP37088 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCNN1AP37088 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.33■□□□□ 0.21
SCNN1AP37088 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.33■□□□□ 0.21
SCNN1AP37088 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCNN1AP37088 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.33■□□□□ 0.21
SCNN1AP37088 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCNN1AP37088 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCNN1AP37088 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCNN1AP37088 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SCNN1AP37088 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.33■□□□□ 0.2
SCNN1AP37088 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SCNN1AP37088 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.33■□□□□ 0.2
SCNN1AP37088 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.33■□□□□ 0.2
SCNN1AP37088 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
SCNN1AP37088 AC011467.4-201ENST00000594891 528 ntBASIC16.33■□□□□ 0.2
SCNN1AP37088 AL355385.1-201ENST00000606123 409 ntBASIC16.33■□□□□ 0.2
SCNN1AP37088 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.33■□□□□ 0.2
SCNN1AP37088 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.33■□□□□ 0.2
SCNN1AP37088 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SCNN1AP37088 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.33■□□□□ 0.2
SCNN1AP37088 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.33■□□□□ 0.2
SCNN1AP37088 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCNN1AP37088 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.33■□□□□ 0.2
SCNN1AP37088 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCNN1AP37088 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.32■□□□□ 0.2
SCNN1AP37088 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.32■□□□□ 0.2
SCNN1AP37088 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCNN1AP37088 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCNN1AP37088 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCNN1AP37088 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCNN1AP37088 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.32■□□□□ 0.2
SCNN1AP37088 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCNN1AP37088 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms