Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.24■□□□□ 0.67
PDE6BP35913 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 AC011477.6-201ENST00000604980 1927 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PDE6BP35913 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 MIR769-201ENST00000390225 118 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 COX5BP1-201ENST00000507622 393 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 AC091812.3-201ENST00000621362 345 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 CU633904.3-201ENST00000624042 1029 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 PRSS30P-206ENST00000641773 873 ntBASIC19.23■□□□□ 0.67
PDE6BP35913 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.23■□□□□ 0.67
PDE6BP35913 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6BP35913 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.23■□□□□ 0.67
PDE6BP35913 PKD1P1-201ENST00000458669 6805 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6BP35913 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PDE6BP35913 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.22■□□□□ 0.67
PDE6BP35913 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6BP35913 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 AC148477.4-201ENST00000613430 1793 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6BP35913 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PDE6BP35913 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6BP35913 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.22■□□□□ 0.67
PDE6BP35913 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.22■□□□□ 0.67
PDE6BP35913 CYP46A4P-201ENST00000414953 267 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PDE6BP35913 IMP3P2-201ENST00000489760 475 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PDE6BP35913 AC097724.1-201ENST00000609581 426 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 ENPP7P14-201ENST00000621765 1040 ntBASIC19.22■□□□□ 0.67
PDE6BP35913 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6BP35913 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PDE6BP35913 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PDE6BP35913 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.22■□□□□ 0.67
PDE6BP35913 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.22■□□□□ 0.67
PDE6BP35913 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
PDE6BP35913 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 LRRC59-203ENST00000576448 1531 ntBASIC19.21■□□□□ 0.67
PDE6BP35913 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.21■□□□□ 0.67
PDE6BP35913 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 MIR648-201ENST00000385046 94 ntBASIC19.21■□□□□ 0.67
PDE6BP35913 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 FAM8A4P-201ENST00000435433 1213 ntBASIC19.21■□□□□ 0.67
PDE6BP35913 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE6BP35913 AL133466.1-201ENST00000447582 150 ntBASIC19.21■□□□□ 0.67
PDE6BP35913 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.21■□□□□ 0.67
PDE6BP35913 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.21■□□□□ 0.67
PDE6BP35913 AC245884.6-201ENST00000515672 1067 ntBASIC19.21■□□□□ 0.67
PDE6BP35913 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE6BP35913 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 MIR4706-201ENST00000582134 82 ntBASIC19.21■□□□□ 0.67
PDE6BP35913 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE6BP35913 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.21■□□□□ 0.67
PDE6BP35913 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE6BP35913 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms