Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 AC073389.1-201ENST00000595595 795 ntBASIC16.7■□□□□ 0.26
CHRNA3P32297 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA3P32297 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA3P32297 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.7■□□□□ 0.26
CHRNA3P32297 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA3P32297 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA3P32297 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA3P32297 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA3P32297 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 AC092127.1-201ENST00000567093 3455 ntBASIC16.7■□□□□ 0.26
CHRNA3P32297 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA3P32297 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
CHRNA3P32297 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA3P32297 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CHRNA3P32297 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA3P32297 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA3P32297 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA3P32297 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA3P32297 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA3P32297 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA3P32297 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA3P32297 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA3P32297 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA3P32297 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA3P32297 SPDYE14P-201ENST00000442619 822 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA3P32297 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA3P32297 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA3P32297 ALG1L8P-201ENST00000533887 760 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 AC069262.1-201ENST00000539058 672 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 AC015911.4-201ENST00000588022 1070 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 AC093512.1-201ENST00000617969 520 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA3P32297 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 AC112693.3-201ENST00000624819 1983 ntBASIC16.69■□□□□ 0.26
CHRNA3P32297 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA3P32297 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA3P32297 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CHRNA3P32297 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.68■□□□□ 0.26
CHRNA3P32297 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 AC142381.1-201ENST00000426099 345 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA3P32297 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 CNN2P2-201ENST00000443536 909 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 CNN2P3-201ENST00000450201 906 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 AC067863.1-201ENST00000494933 530 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA3P32297 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA3P32297 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA3P32297 AL136317.3-201ENST00000618497 906 ntBASIC16.68■□□□□ 0.26
CHRNA3P32297 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA3P32297 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA3P32297 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms