Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
EPHA3P29320 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
EPHA3P29320 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
EPHA3P29320 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.42■□□□□ 0.06
EPHA3P29320 AC025580.3-201ENST00000617932 1424 ntBASIC15.42■□□□□ 0.06
EPHA3P29320 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.42■□□□□ 0.06
EPHA3P29320 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.42■□□□□ 0.06
EPHA3P29320 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
EPHA3P29320 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA3P29320 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.42■□□□□ 0.06
EPHA3P29320 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA3P29320 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.41■□□□□ 0.06
EPHA3P29320 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.41■□□□□ 0.06
EPHA3P29320 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.41■□□□□ 0.06
EPHA3P29320 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.41■□□□□ 0.06
EPHA3P29320 AC079781.3-201ENST00000449110 356 ntBASIC15.41■□□□□ 0.06
EPHA3P29320 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.41■□□□□ 0.06
EPHA3P29320 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
EPHA3P29320 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA3P29320 AC061975.2-201ENST00000581722 295 ntBASIC15.41■□□□□ 0.06
EPHA3P29320 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
EPHA3P29320 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EPHA3P29320 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA3P29320 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA3P29320 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA3P29320 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA3P29320 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA3P29320 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA3P29320 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.4■□□□□ 0.06
EPHA3P29320 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.4■□□□□ 0.06
EPHA3P29320 AL031284.1-201ENST00000419297 478 ntBASIC15.4■□□□□ 0.06
EPHA3P29320 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA3P29320 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.4■□□□□ 0.06
EPHA3P29320 RNA5SP415-201ENST00000517246 115 ntBASIC15.4■□□□□ 0.06
EPHA3P29320 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.4■□□□□ 0.06
EPHA3P29320 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA3P29320 AL138918.1-201ENST00000568306 659 ntBASIC15.4■□□□□ 0.06
EPHA3P29320 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA3P29320 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 AL773604.1-201ENST00000617417 272 ntBASIC15.4■□□□□ 0.06
EPHA3P29320 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EPHA3P29320 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EPHA3P29320 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 BCAR1-209ENST00000546196 1340 ntBASIC15.4■□□□□ 0.06
EPHA3P29320 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA3P29320 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA3P29320 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA3P29320 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
EPHA3P29320 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EPHA3P29320 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms