Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VCLP18206 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VCLP18206 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VCLP18206 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VCLP18206 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VCLP18206 AP005117.1-202ENST00000581724 1908 ntBASIC15.96■□□□□ 0.14
VCLP18206 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.95■□□□□ 0.14
VCLP18206 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.95■□□□□ 0.14
VCLP18206 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.95■□□□□ 0.14
VCLP18206 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.95■□□□□ 0.14
VCLP18206 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
VCLP18206 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.95■□□□□ 0.14
VCLP18206 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.95■□□□□ 0.14
VCLP18206 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.95■□□□□ 0.14
VCLP18206 AC061975.2-201ENST00000581722 295 ntBASIC15.95■□□□□ 0.14
VCLP18206 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.95■□□□□ 0.14
VCLP18206 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VCLP18206 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
VCLP18206 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
VCLP18206 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 LINC02447-202ENST00000501888 2146 ntBASIC15.95■□□□□ 0.14
VCLP18206 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
VCLP18206 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VCLP18206 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.95■□□□□ 0.14
VCLP18206 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 CDC14C-201ENST00000428251 1719 ntBASIC15.94■□□□□ 0.14
VCLP18206 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
VCLP18206 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.94■□□□□ 0.14
VCLP18206 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.94■□□□□ 0.14
VCLP18206 MIR943-201ENST00000401286 94 ntBASIC15.94■□□□□ 0.14
VCLP18206 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.94■□□□□ 0.14
VCLP18206 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.94■□□□□ 0.14
VCLP18206 AC245100.5-201ENST00000452108 331 ntBASIC15.94■□□□□ 0.14
VCLP18206 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.94■□□□□ 0.14
VCLP18206 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.94■□□□□ 0.14
VCLP18206 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.94■□□□□ 0.14
VCLP18206 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
VCLP18206 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.94■□□□□ 0.14
VCLP18206 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
VCLP18206 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.94■□□□□ 0.14
VCLP18206 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.94■□□□□ 0.14
VCLP18206 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.94■□□□□ 0.14
VCLP18206 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.94■□□□□ 0.14
VCLP18206 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VCLP18206 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VCLP18206 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VCLP18206 PPT1-215ENST00000641471 2368 ntBASIC15.93■□□□□ 0.14
VCLP18206 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.93■□□□□ 0.14
VCLP18206 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VCLP18206 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms