Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CTLA4P16410 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CTLA4P16410 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTLA4P16410 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTLA4P16410 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.02□□□□□ -0.16
CTLA4P16410 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTLA4P16410 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTLA4P16410 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTLA4P16410 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
CTLA4P16410 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.02□□□□□ -0.16
CTLA4P16410 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTLA4P16410 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.02□□□□□ -0.16
CTLA4P16410 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.02□□□□□ -0.17
CTLA4P16410 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.02□□□□□ -0.17
CTLA4P16410 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 HIST3H2BA-201ENST00000436555 524 ntBASIC14.02□□□□□ -0.17
CTLA4P16410 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 MTND6P24-201ENST00000440466 518 ntBASIC14.02□□□□□ -0.17
CTLA4P16410 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 MIR4453-201ENST00000584019 89 ntBASIC14.02□□□□□ -0.17
CTLA4P16410 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CTLA4P16410 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 RN7SL828P-201ENST00000607615 303 ntBASIC14.02□□□□□ -0.17
CTLA4P16410 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 MIR6080-201ENST00000617359 66 ntBASIC14.02□□□□□ -0.17
CTLA4P16410 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.02□□□□□ -0.17
CTLA4P16410 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CTLA4P16410 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.02□□□□□ -0.17
CTLA4P16410 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CTLA4P16410 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CTLA4P16410 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTLA4P16410 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CTLA4P16410 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.02□□□□□ -0.17
CTLA4P16410 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.01□□□□□ -0.17
CTLA4P16410 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTLA4P16410 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CTLA4P16410 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.01□□□□□ -0.17
CTLA4P16410 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.01□□□□□ -0.17
CTLA4P16410 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.01□□□□□ -0.17
CTLA4P16410 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CTLA4P16410 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTLA4P16410 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.01□□□□□ -0.17
CTLA4P16410 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.01□□□□□ -0.17
CTLA4P16410 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.01□□□□□ -0.17
CTLA4P16410 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTLA4P16410 AC067930.6-201ENST00000623257 4947 ntBASIC14.01□□□□□ -0.17
CTLA4P16410 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTLA4P16410 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14□□□□□ -0.17
CTLA4P16410 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CTLA4P16410 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTLA4P16410 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms