Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TOP2AP11388 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TOP2AP11388 AC116345.2-201ENST00000512837 523 ntBASIC26.92■■□□□ 1.9
TOP2AP11388 AC134698.3-201ENST00000523880 214 ntBASIC26.92■■□□□ 1.9
TOP2AP11388 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC26.92■■□□□ 1.9
TOP2AP11388 AL133499.1-201ENST00000596207 608 ntBASIC26.92■■□□□ 1.9
TOP2AP11388 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC26.92■■□□□ 1.9
TOP2AP11388 PCBP2-OT1-201ENST00000634357 590 ntBASIC26.92■■□□□ 1.9
TOP2AP11388 AC068587.8-201ENST00000641239 219 ntBASIC26.92■■□□□ 1.9
TOP2AP11388 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TOP2AP11388 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TOP2AP11388 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TOP2AP11388 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
TOP2AP11388 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
TOP2AP11388 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC26.91■■□□□ 1.9
TOP2AP11388 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC26.91■■□□□ 1.9
TOP2AP11388 NPPA-201ENST00000376476 728 ntTSL 3 BASIC26.91■■□□□ 1.9
TOP2AP11388 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
TOP2AP11388 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
TOP2AP11388 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 MSRA-203ENST00000441698 788 ntTSL 2 BASIC26.91■■□□□ 1.9
TOP2AP11388 CFL1-214ENST00000534769 758 ntTSL 2 BASIC26.91■■□□□ 1.9
TOP2AP11388 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC26.91■■□□□ 1.9
TOP2AP11388 AP000346.4-201ENST00000614827 381 ntBASIC26.91■■□□□ 1.9
TOP2AP11388 AL023803.2-201ENST00000620080 638 ntBASIC26.91■■□□□ 1.9
TOP2AP11388 AL162426.1-201ENST00000624141 743 ntBASIC26.91■■□□□ 1.9
TOP2AP11388 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
TOP2AP11388 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC26.91■■□□□ 1.9
TOP2AP11388 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 GCK-209ENST00000616242 2260 ntTSL 5 BASIC26.91■■□□□ 1.9
TOP2AP11388 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC26.91■■□□□ 1.9
TOP2AP11388 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
TOP2AP11388 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TOP2AP11388 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
TOP2AP11388 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC26.9■■□□□ 1.9
TOP2AP11388 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC26.9■■□□□ 1.9
TOP2AP11388 SLC16A6P1-201ENST00000413214 1059 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC26.9■■□□□ 1.9
TOP2AP11388 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC26.9■■□□□ 1.9
TOP2AP11388 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 AC099398.1-201ENST00000567919 2776 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 FRMD6-AS1-201ENST00000617151 2229 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC26.9■■□□□ 1.9
TOP2AP11388 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC26.9■■□□□ 1.9
TOP2AP11388 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
TOP2AP11388 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 AC092364.2-201ENST00000596710 2692 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 AC106820.2-201ENST00000563775 3264 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC26.9■■□□□ 1.9
TOP2AP11388 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 AC010141.1-201ENST00000411585 623 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC26.9■■□□□ 1.9
TOP2AP11388 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TOP2AP11388 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC26.9■■□□□ 1.9
TOP2AP11388 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC26.9■■□□□ 1.9
TOP2AP11388 PRKXP1-201ENST00000561423 1122 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 MIR3907-201ENST00000579424 151 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 AC005324.6-201ENST00000587972 613 ntBASIC26.9■■□□□ 1.9
TOP2AP11388 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC26.9■■□□□ 1.9
TOP2AP11388 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
TOP2AP11388 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
TOP2AP11388 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC26.9■■□□□ 1.9
TOP2AP11388 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC26.9■■□□□ 1.9
TOP2AP11388 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
TOP2AP11388 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
TOP2AP11388 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
TOP2AP11388 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
TOP2AP11388 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
TOP2AP11388 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TOP2AP11388 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
TOP2AP11388 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TOP2AP11388 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
TOP2AP11388 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TOP2AP11388 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TOP2AP11388 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TOP2AP11388 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TOP2AP11388 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC26.89■■□□□ 1.89
TOP2AP11388 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC26.89■■□□□ 1.89
TOP2AP11388 SUPT4H1P2-201ENST00000501248 353 ntBASIC26.89■■□□□ 1.89
TOP2AP11388 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TOP2AP11388 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC26.89■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms