Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.56■□□□□ 0.56
TOP1P11387 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.56■□□□□ 0.56
TOP1P11387 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.56■□□□□ 0.56
TOP1P11387 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TOP1P11387 MEIS3P1-201ENST00000495167 958 ntBASIC18.56■□□□□ 0.56
TOP1P11387 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 AC023310.3-201ENST00000557027 670 ntBASIC18.56■□□□□ 0.56
TOP1P11387 AC100756.1-201ENST00000562736 682 ntBASIC18.56■□□□□ 0.56
TOP1P11387 AC138749.3-201ENST00000567691 622 ntBASIC18.56■□□□□ 0.56
TOP1P11387 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.56■□□□□ 0.56
TOP1P11387 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.56■□□□□ 0.56
TOP1P11387 AC116165.1-201ENST00000611806 668 ntBASIC18.56■□□□□ 0.56
TOP1P11387 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.56■□□□□ 0.56
TOP1P11387 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TOP1P11387 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TOP1P11387 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 LINC02447-202ENST00000501888 2146 ntBASIC18.56■□□□□ 0.56
TOP1P11387 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.56■□□□□ 0.56
TOP1P11387 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 SLC7A15P-201ENST00000424028 1363 ntBASIC18.55■□□□□ 0.56
TOP1P11387 AL391825.1-201ENST00000457671 1364 ntBASIC18.55■□□□□ 0.56
TOP1P11387 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.55■□□□□ 0.56
TOP1P11387 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 MEP1AP4-201ENST00000423244 1087 ntBASIC18.55■□□□□ 0.56
TOP1P11387 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.55■□□□□ 0.56
TOP1P11387 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
TOP1P11387 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
TOP1P11387 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.55■□□□□ 0.56
TOP1P11387 AF228730.6-201ENST00000641497 218 ntBASIC18.55■□□□□ 0.56
TOP1P11387 AC084121.3-201ENST00000641716 218 ntBASIC18.55■□□□□ 0.56
TOP1P11387 AC105233.6-201ENST00000642093 218 ntBASIC18.55■□□□□ 0.56
TOP1P11387 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TOP1P11387 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TOP1P11387 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP1P11387 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TOP1P11387 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP1P11387 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.54■□□□□ 0.56
TOP1P11387 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
TOP1P11387 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP1P11387 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TOP1P11387 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP1P11387 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.54■□□□□ 0.56
TOP1P11387 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP1P11387 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.54■□□□□ 0.56
TOP1P11387 AC055876.2-201ENST00000531834 546 ntBASIC18.54■□□□□ 0.56
TOP1P11387 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 AC027307.3-201ENST00000594262 1100 ntBASIC18.54■□□□□ 0.56
TOP1P11387 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TOP1P11387 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TOP1P11387 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP1P11387 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TOP1P11387 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 AC087499.6-201ENST00000411576 835 ntBASIC18.53■□□□□ 0.56
TOP1P11387 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms