Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FAM228BP0C875 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FAM228BP0C875 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FAM228BP0C875 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FAM228BP0C875 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM228BP0C875 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.84■□□□□ 0.29
FAM228BP0C875 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM228BP0C875 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM228BP0C875 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM228BP0C875 AC022145.2-201ENST00000598203 171 ntBASIC16.84■□□□□ 0.29
FAM228BP0C875 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM228BP0C875 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FAM228BP0C875 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
FAM228BP0C875 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FAM228BP0C875 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM228BP0C875 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.84■□□□□ 0.29
FAM228BP0C875 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM228BP0C875 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.83■□□□□ 0.29
FAM228BP0C875 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
FAM228BP0C875 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM228BP0C875 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM228BP0C875 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM228BP0C875 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM228BP0C875 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
FAM228BP0C875 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.83■□□□□ 0.28
FAM228BP0C875 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 FAM58DP-201ENST00000428076 619 ntBASIC16.83■□□□□ 0.28
FAM228BP0C875 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.83■□□□□ 0.28
FAM228BP0C875 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM228BP0C875 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
FAM228BP0C875 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.83■□□□□ 0.28
FAM228BP0C875 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM228BP0C875 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.83■□□□□ 0.28
FAM228BP0C875 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM228BP0C875 FAM45BP-202ENST00000592932 1624 ntBASIC16.83■□□□□ 0.28
FAM228BP0C875 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 LINC01101-201ENST00000622953 1884 ntBASIC16.83■□□□□ 0.28
FAM228BP0C875 AC055717.3-201ENST00000622967 595 ntBASIC16.83■□□□□ 0.28
FAM228BP0C875 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM228BP0C875 AC105339.1-204ENST00000636249 355 ntBASIC16.83■□□□□ 0.28
FAM228BP0C875 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
FAM228BP0C875 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FAM228BP0C875 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM228BP0C875 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM228BP0C875 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms