Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 AC126755.1-201ENST00000525846 6405 ntBASIC13.29□□□□□ -0.28
GAPDHP04406 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GAPDHP04406 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAPDHP04406 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.29□□□□□ -0.28
GAPDHP04406 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAPDHP04406 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GAPDHP04406 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GAPDHP04406 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAPDHP04406 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAPDHP04406 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
GAPDHP04406 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GAPDHP04406 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GAPDHP04406 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.28□□□□□ -0.28
GAPDHP04406 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.28□□□□□ -0.28
GAPDHP04406 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.28□□□□□ -0.28
GAPDHP04406 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.28□□□□□ -0.28
GAPDHP04406 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GAPDHP04406 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.28□□□□□ -0.28
GAPDHP04406 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GAPDHP04406 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 AL592424.1-201ENST00000563624 1536 ntBASIC13.28□□□□□ -0.28
GAPDHP04406 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.28□□□□□ -0.28
GAPDHP04406 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAPDHP04406 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
GAPDHP04406 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
GAPDHP04406 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.27□□□□□ -0.28
GAPDHP04406 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
GAPDHP04406 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GAPDHP04406 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
GAPDHP04406 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.27□□□□□ -0.28
GAPDHP04406 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.27□□□□□ -0.28
GAPDHP04406 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.27□□□□□ -0.28
GAPDHP04406 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
GAPDHP04406 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAPDHP04406 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.27□□□□□ -0.29
GAPDHP04406 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.27□□□□□ -0.29
GAPDHP04406 BX842568.4-201ENST00000421222 227 ntBASIC13.27□□□□□ -0.29
GAPDHP04406 CEND1P1-201ENST00000451006 455 ntBASIC13.27□□□□□ -0.29
GAPDHP04406 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.27□□□□□ -0.29
GAPDHP04406 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAPDHP04406 IGHV3-62-201ENST00000520057 340 ntBASIC13.27□□□□□ -0.29
GAPDHP04406 AC105233.2-201ENST00000523697 349 ntBASIC13.27□□□□□ -0.29
GAPDHP04406 AF228730.5-201ENST00000530288 346 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms