Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
OPN1SWP03999 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.81□□□□□ -0.04
OPN1SWP03999 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.81□□□□□ -0.04
OPN1SWP03999 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.81□□□□□ -0.04
OPN1SWP03999 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.81□□□□□ -0.04
OPN1SWP03999 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.81□□□□□ -0.04
OPN1SWP03999 AC027307.2-201ENST00000591252 911 ntBASIC14.81□□□□□ -0.04
OPN1SWP03999 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.81□□□□□ -0.04
OPN1SWP03999 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.81□□□□□ -0.04
OPN1SWP03999 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.81□□□□□ -0.04
OPN1SWP03999 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
OPN1SWP03999 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
OPN1SWP03999 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AL355306.1-201ENST00000415580 579 ntBASIC14.8□□□□□ -0.04
OPN1SWP03999 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.8□□□□□ -0.04
OPN1SWP03999 TPM4P1-201ENST00000436100 807 ntBASIC14.8□□□□□ -0.04
OPN1SWP03999 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.8□□□□□ -0.04
OPN1SWP03999 SLC25A1P1-201ENST00000528351 927 ntBASIC14.8□□□□□ -0.04
OPN1SWP03999 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
OPN1SWP03999 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AC091812.2-201ENST00000619081 385 ntBASIC14.8□□□□□ -0.04
OPN1SWP03999 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
OPN1SWP03999 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.8□□□□□ -0.04
OPN1SWP03999 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
OPN1SWP03999 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.79□□□□□ -0.04
OPN1SWP03999 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.79□□□□□ -0.04
OPN1SWP03999 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
OPN1SWP03999 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
OPN1SWP03999 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms