Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 AC010203.1-204ENST00000548782 407 ntBASIC14.17□□□□□ -0.14
APOA1P02647 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.17□□□□□ -0.14
APOA1P02647 LINC01238-205ENST00000567549 1107 ntBASIC14.17□□□□□ -0.14
APOA1P02647 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA1P02647 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.17□□□□□ -0.14
APOA1P02647 AL353135.1-201ENST00000606729 504 ntBASIC14.17□□□□□ -0.14
APOA1P02647 AP000867.4-201ENST00000641616 219 ntBASIC14.17□□□□□ -0.14
APOA1P02647 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 C18orf15-201ENST00000623680 2534 ntBASIC14.17□□□□□ -0.14
APOA1P02647 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA1P02647 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
APOA1P02647 INTS4P1-201ENST00000438455 1935 ntBASIC14.17□□□□□ -0.14
APOA1P02647 AC090616.6-203ENST00000579186 1945 ntBASIC14.17□□□□□ -0.14
APOA1P02647 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
APOA1P02647 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
APOA1P02647 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.16□□□□□ -0.14
APOA1P02647 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.16□□□□□ -0.14
APOA1P02647 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 SPDYE13P-201ENST00000445314 798 ntBASIC14.16□□□□□ -0.14
APOA1P02647 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.16□□□□□ -0.14
APOA1P02647 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.16□□□□□ -0.14
APOA1P02647 MIR4497-201ENST00000583208 89 ntBASIC14.16□□□□□ -0.14
APOA1P02647 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
APOA1P02647 AC112693.3-201ENST00000624819 1983 ntBASIC14.16□□□□□ -0.14
APOA1P02647 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOA1P02647 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOA1P02647 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.15□□□□□ -0.14
APOA1P02647 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
APOA1P02647 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOA1P02647 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOA1P02647 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
APOA1P02647 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.15□□□□□ -0.14
APOA1P02647 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
APOA1P02647 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.15□□□□□ -0.14
APOA1P02647 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.15□□□□□ -0.14
APOA1P02647 CYP2A7P1-201ENST00000595391 815 ntBASIC14.15□□□□□ -0.14
APOA1P02647 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms