Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL5O76039 TEX28P1-201ENST00000613479 1221 ntBASIC18.36■□□□□ 0.53
CDKL5O76039 TEX28P2-201ENST00000617764 1221 ntBASIC18.36■□□□□ 0.53
CDKL5O76039 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKL5O76039 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL5O76039 AC093028.1-201ENST00000622998 982 ntBASIC18.36■□□□□ 0.53
CDKL5O76039 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKL5O76039 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL5O76039 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL5O76039 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDKL5O76039 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKL5O76039 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL5O76039 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKL5O76039 RN7SL618P-201ENST00000477850 296 ntBASIC18.35■□□□□ 0.53
CDKL5O76039 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKL5O76039 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL5O76039 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL5O76039 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CDKL5O76039 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL5O76039 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL5O76039 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 Z97205.2-201ENST00000564697 1639 ntBASIC18.34■□□□□ 0.53
CDKL5O76039 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CDKL5O76039 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 KRT18P28-201ENST00000453838 1332 ntBASIC18.34■□□□□ 0.53
CDKL5O76039 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL5O76039 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.34■□□□□ 0.53
CDKL5O76039 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CDKL5O76039 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL5O76039 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms