Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.91■□□□□ 0.14
GPC4O75487 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.91■□□□□ 0.14
GPC4O75487 RNA5SP410-201ENST00000516285 106 ntBASIC15.91■□□□□ 0.14
GPC4O75487 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.91■□□□□ 0.14
GPC4O75487 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 AC079781.4-201ENST00000641908 219 ntBASIC15.91■□□□□ 0.14
GPC4O75487 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GPC4O75487 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GPC4O75487 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GPC4O75487 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.9■□□□□ 0.14
GPC4O75487 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 RBPMS2P1-201ENST00000437762 623 ntBASIC15.9■□□□□ 0.14
GPC4O75487 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.9■□□□□ 0.14
GPC4O75487 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 AP001160.2-201ENST00000596071 487 ntBASIC15.9■□□□□ 0.14
GPC4O75487 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.9■□□□□ 0.14
GPC4O75487 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 AC008677.1-201ENST00000519230 1561 ntBASIC15.9■□□□□ 0.14
GPC4O75487 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
GPC4O75487 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
GPC4O75487 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GPC4O75487 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
GPC4O75487 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 AC013268.4-201ENST00000637413 2228 ntBASIC15.89■□□□□ 0.13
GPC4O75487 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 RPS8P6-201ENST00000426177 609 ntBASIC15.89■□□□□ 0.13
GPC4O75487 SPDYE14P-201ENST00000442619 822 ntBASIC15.89■□□□□ 0.13
GPC4O75487 HLA-J-203ENST00000494367 1087 ntBASIC15.89■□□□□ 0.13
GPC4O75487 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms