Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.8□□□□□ -0.04
CTNSO60931 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTNSO60931 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.8□□□□□ -0.04
CTNSO60931 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTNSO60931 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.8□□□□□ -0.04
CTNSO60931 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTNSO60931 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTNSO60931 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CTNSO60931 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTNSO60931 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
CTNSO60931 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.79□□□□□ -0.04
CTNSO60931 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.79□□□□□ -0.04
CTNSO60931 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.79□□□□□ -0.04
CTNSO60931 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.79□□□□□ -0.04
CTNSO60931 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.79□□□□□ -0.04
CTNSO60931 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CTNSO60931 MIR4745-201ENST00000577608 62 ntBASIC14.79□□□□□ -0.04
CTNSO60931 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CTNSO60931 AC092364.2-202ENST00000597012 1073 ntBASIC14.79□□□□□ -0.04
CTNSO60931 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.79□□□□□ -0.04
CTNSO60931 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.79□□□□□ -0.04
CTNSO60931 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTNSO60931 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CTNSO60931 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 PAUPAR-201ENST00000630360 2965 ntBASIC14.78□□□□□ -0.04
CTNSO60931 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 AC138969.3-201ENST00000546612 1459 ntBASIC14.78□□□□□ -0.04
CTNSO60931 AC138932.2-201ENST00000548268 1459 ntBASIC14.78□□□□□ -0.04
CTNSO60931 AC126755.4-201ENST00000549796 1459 ntBASIC14.78□□□□□ -0.04
CTNSO60931 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.78□□□□□ -0.04
CTNSO60931 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
CTNSO60931 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.78□□□□□ -0.04
CTNSO60931 KRT18P64-201ENST00000434946 1219 ntBASIC14.78□□□□□ -0.04
CTNSO60931 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.78□□□□□ -0.04
CTNSO60931 DOC2GP-202ENST00000514950 1163 ntBASIC14.78□□□□□ -0.04
CTNSO60931 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
CTNSO60931 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CTNSO60931 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CTNSO60931 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.78□□□□□ -0.04
CTNSO60931 AC104794.3-201ENST00000566840 1248 ntBASIC14.78□□□□□ -0.04
CTNSO60931 RN7SL204P-201ENST00000582831 262 ntBASIC14.78□□□□□ -0.04
CTNSO60931 LINC02560-201ENST00000596379 459 ntBASIC14.78□□□□□ -0.04
CTNSO60931 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.78□□□□□ -0.04
CTNSO60931 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
CTNSO60931 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CTNSO60931 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CTNSO60931 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTNSO60931 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTNSO60931 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms