Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GFRA3O60609 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GFRA3O60609 RPL8P2-201ENST00000430538 502 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA3O60609 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA3O60609 CHMP1AP1-201ENST00000445563 662 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA3O60609 RCC2P8-201ENST00000502779 1035 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 AL132657.2-201ENST00000564417 358 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 MIR5196-201ENST00000578146 115 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.11■□□□□ 0.01
GFRA3O60609 AC105137.3-201ENST00000617588 984 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 AL034417.3-201ENST00000641100 1043 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 BNIP3P1-202ENST00000550043 1585 ntBASIC15.11■□□□□ 0.01
GFRA3O60609 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 ABALON-201ENST00000629058 1903 ntBASIC15.1■□□□□ 0.01
GFRA3O60609 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA3O60609 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GFRA3O60609 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA3O60609 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 RN7SL67P-201ENST00000492147 296 ntBASIC15.1■□□□□ 0.01
GFRA3O60609 GAPDHP40-201ENST00000505218 1006 ntBASIC15.1■□□□□ 0.01
GFRA3O60609 SCARNA21-201ENST00000517026 139 ntBASIC15.1■□□□□ 0.01
GFRA3O60609 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA3O60609 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.1■□□□□ 0.01
GFRA3O60609 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
GFRA3O60609 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GFRA3O60609 AC073592.2-201ENST00000623062 780 ntBASIC15.1■□□□□ 0.01
GFRA3O60609 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GFRA3O60609 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA3O60609 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA3O60609 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.1■□□□□ 0.01
GFRA3O60609 CAP2P1-201ENST00000557743 1390 ntBASIC15.1■□□□□ 0.01
GFRA3O60609 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA3O60609 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA3O60609 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.09■□□□□ 0.01
GFRA3O60609 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA3O60609 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms