Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.92□□□□□ -0.5
SNAI2O43623 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.92□□□□□ -0.5
SNAI2O43623 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.92□□□□□ -0.5
SNAI2O43623 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SNAI2O43623 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.92□□□□□ -0.5
SNAI2O43623 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SNAI2O43623 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
SNAI2O43623 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SNAI2O43623 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.91□□□□□ -0.5
SNAI2O43623 AC010327.5-201ENST00000586923 3061 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.91□□□□□ -0.5
SNAI2O43623 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.91□□□□□ -0.5
SNAI2O43623 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
SNAI2O43623 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SNAI2O43623 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SNAI2O43623 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 AC245100.5-201ENST00000452108 331 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.91□□□□□ -0.5
SNAI2O43623 SART3-203ENST00000546611 1184 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 AC006557.2-201ENST00000592985 1240 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 AC021097.1-201ENST00000607902 574 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 AC138969.2-201ENST00000532739 9932 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 AC011477.6-201ENST00000604980 1927 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 AC087481.3-201ENST00000602886 1894 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.91□□□□□ -0.5
SNAI2O43623 AC012569.1-201ENST00000591191 1524 ntBASIC11.91□□□□□ -0.5
SNAI2O43623 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SNAI2O43623 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
SNAI2O43623 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
SNAI2O43623 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.9□□□□□ -0.5
SNAI2O43623 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.9□□□□□ -0.5
SNAI2O43623 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.9□□□□□ -0.5
SNAI2O43623 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SNAI2O43623 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
SNAI2O43623 LAGE3P1-201ENST00000425356 484 ntBASIC11.9□□□□□ -0.5
SNAI2O43623 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.9□□□□□ -0.5
SNAI2O43623 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.9□□□□□ -0.5
SNAI2O43623 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.9□□□□□ -0.5
SNAI2O43623 RPS15P9-201ENST00000494093 319 ntBASIC11.9□□□□□ -0.5
SNAI2O43623 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms